TAP SWI/SNF_SNF2 in Amaranthus hypochondriacus

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

SNF2_N
AP2
PHD
zf-CCCH
HMG_box
Myb_DNA-binding

(Domain names are clickable)



List of proteins (36)

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namename additionClick button to show/hide sequence: Download sequence?
AHYPO_000038-RApacid=32845047 transcript=AHYPO_000038-RA locus=AHYPO_000038 ID=AHYPO_000038-RA.v1.0 annot-version=v1.0
AHYPO_001416-RApacid=32832824 transcript=AHYPO_001416-RA locus=AHYPO_001416 ID=AHYPO_001416-RA.v1.0 annot-version=v1.0
AHYPO_002509-RApacid=32840547 transcript=AHYPO_002509-RA locus=AHYPO_002509 ID=AHYPO_002509-RA.v1.0 annot-version=v1.0
AHYPO_003862-RApacid=32833144 transcript=AHYPO_003862-RA locus=AHYPO_003862 ID=AHYPO_003862-RA.v1.0 annot-version=v1.0
AHYPO_003869-RApacid=32833142 transcript=AHYPO_003869-RA locus=AHYPO_003869 ID=AHYPO_003869-RA.v1.0 annot-version=v1.0
AHYPO_003975-RApacid=32846686 transcript=AHYPO_003975-RA locus=AHYPO_003975 ID=AHYPO_003975-RA.v1.0 annot-version=v1.0
AHYPO_004162-RApacid=32834129 transcript=AHYPO_004162-RA locus=AHYPO_004162 ID=AHYPO_004162-RA.v1.0 annot-version=v1.0
AHYPO_005323-RApacid=32835058 transcript=AHYPO_005323-RA locus=AHYPO_005323 ID=AHYPO_005323-RA.v1.0 annot-version=v1.0
AHYPO_005733-RApacid=32828792 transcript=AHYPO_005733-RA locus=AHYPO_005733 ID=AHYPO_005733-RA.v1.0 annot-version=v1.0
AHYPO_006141-RApacid=32828467 transcript=AHYPO_006141-RA locus=AHYPO_006141 ID=AHYPO_006141-RA.v1.0 annot-version=v1.0
AHYPO_008085-RApacid=32832284 transcript=AHYPO_008085-RA locus=AHYPO_008085 ID=AHYPO_008085-RA.v1.0 annot-version=v1.0
AHYPO_008436-RApacid=32835496 transcript=AHYPO_008436-RA locus=AHYPO_008436 ID=AHYPO_008436-RA.v1.0 annot-version=v1.0
AHYPO_008497-RApacid=32835473 transcript=AHYPO_008497-RA locus=AHYPO_008497 ID=AHYPO_008497-RA.v1.0 annot-version=v1.0
AHYPO_008802-RApacid=32828246 transcript=AHYPO_008802-RA locus=AHYPO_008802 ID=AHYPO_008802-RA.v1.0 annot-version=v1.0
AHYPO_008806-RApacid=32828224 transcript=AHYPO_008806-RA locus=AHYPO_008806 ID=AHYPO_008806-RA.v1.0 annot-version=v1.0
AHYPO_009954-RApacid=32843112 transcript=AHYPO_009954-RA locus=AHYPO_009954 ID=AHYPO_009954-RA.v1.0 annot-version=v1.0
AHYPO_010121-RApacid=32844087 transcript=AHYPO_010121-RA locus=AHYPO_010121 ID=AHYPO_010121-RA.v1.0 annot-version=v1.0
AHYPO_010484-RApacid=32828327 transcript=AHYPO_010484-RA locus=AHYPO_010484 ID=AHYPO_010484-RA.v1.0 annot-version=v1.0
AHYPO_010897-RApacid=32824439 transcript=AHYPO_010897-RA locus=AHYPO_010897 ID=AHYPO_010897-RA.v1.0 annot-version=v1.0
AHYPO_011365-RApacid=32841611 transcript=AHYPO_011365-RA locus=AHYPO_011365 ID=AHYPO_011365-RA.v1.0 annot-version=v1.0
AHYPO_012143-RApacid=32837575 transcript=AHYPO_012143-RA locus=AHYPO_012143 ID=AHYPO_012143-RA.v1.0 annot-version=v1.0
AHYPO_012256-RApacid=32842654 transcript=AHYPO_012256-RA locus=AHYPO_012256 ID=AHYPO_012256-RA.v1.0 annot-version=v1.0
AHYPO_013003-RApacid=32824901 transcript=AHYPO_013003-RA locus=AHYPO_013003 ID=AHYPO_013003-RA.v1.0 annot-version=v1.0
AHYPO_013498-RApacid=32837544 transcript=AHYPO_013498-RA locus=AHYPO_013498 ID=AHYPO_013498-RA.v1.0 annot-version=v1.0
AHYPO_013547-RApacid=32832997 transcript=AHYPO_013547-RA locus=AHYPO_013547 ID=AHYPO_013547-RA.v1.0 annot-version=v1.0
AHYPO_014110-RApacid=32832396 transcript=AHYPO_014110-RA locus=AHYPO_014110 ID=AHYPO_014110-RA.v1.0 annot-version=v1.0
AHYPO_014285-RApacid=32824330 transcript=AHYPO_014285-RA locus=AHYPO_014285 ID=AHYPO_014285-RA.v1.0 annot-version=v1.0
AHYPO_014622-RApacid=32823808 transcript=AHYPO_014622-RA locus=AHYPO_014622 ID=AHYPO_014622-RA.v1.0 annot-version=v1.0
AHYPO_016797-RApacid=32838643 transcript=AHYPO_016797-RA locus=AHYPO_016797 ID=AHYPO_016797-RA.v1.0 annot-version=v1.0
AHYPO_017761-RApacid=32841994 transcript=AHYPO_017761-RA locus=AHYPO_017761 ID=AHYPO_017761-RA.v1.0 annot-version=v1.0
AHYPO_019353-RApacid=32845254 transcript=AHYPO_019353-RA locus=AHYPO_019353 ID=AHYPO_019353-RA.v1.0 annot-version=v1.0
AHYPO_019569-RApacid=32840940 transcript=AHYPO_019569-RA locus=AHYPO_019569 ID=AHYPO_019569-RA.v1.0 annot-version=v1.0
AHYPO_020308-RApacid=32832448 transcript=AHYPO_020308-RA locus=AHYPO_020308 ID=AHYPO_020308-RA.v1.0 annot-version=v1.0
AHYPO_021323-RApacid=32830088 transcript=AHYPO_021323-RA locus=AHYPO_021323 ID=AHYPO_021323-RA.v1.0 annot-version=v1.0
AHYPO_022045-RApacid=32844092 transcript=AHYPO_022045-RA locus=AHYPO_022045 ID=AHYPO_022045-RA.v1.0 annot-version=v1.0
AHYPO_022098-RApacid=32834726 transcript=AHYPO_022098-RA locus=AHYPO_022098 ID=AHYPO_022098-RA.v1.0 annot-version=v1.0
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
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